The evolution of the atmospheric oxygen content through Earth’s history is a key issue in paleoclimatic and paleoenvironmental research. There were at least two oxygenation events in the Precambrian that involved fundamental changes in both biotic innovation and the surface environment. However, a large dissolved organic carbon (DOC) pool maintained in deep oceans during the Neoproterozoic may have extended the time interval between the two oxygenation events. To test the DOC hypothesis, we conducted detailed micro-drilled analyses of carbonate carbon isotopes (δ
13C
carb) of a long Ediacaran drill core (the Wangji drill core), for which whole-rock δ
13C
carb and organic carbon isotope (δ
13C
org) records were available. The micro-drilled δ
13C
carb values obtained in this study are consistent with whole-rock δ
13C
carb results, precluding the influence of severe authigenic carbonate incorporation. Importantly, the multiple negative δ
13C
carb excursions in the Wangji drill core were likely linked with upwelling events, during which DOC was supplied to the surface water and oxidized. Using box models, we estimate that ~3.6 × 10
19 mol and ~2.0 × 10
19 mol DOC were converted to bicarbonate during two negative δ
13C
carb excursions spanning millions of years. The estimations are approximately 1000 times the modern marine DOC reservoir. Our results support a relatively high oxidation capacity (elevated atmospheric
pO
2 and/or oceanic
\rmSO_4^2 - ) of the Earth’s surface during the early Ediacaran Period.